Gene set enrichment analysis is foundational to the interpretation of high throughput biology. Identifying enriched Gene Ontology (GO) terms or disease-associated gene sets within a list of gene ...
Large language models (LLMs) demonstrate potential as assistants in functional genomics, offering a new avenue for gene set analysis. In our evaluation of five LLMs, GPT-4 was the top-performing model ...
Representative visualization features of the GseaVis R package showing enhanced GSEA plots, multi-pathway comparisons, heatmap annotations, and circular layout options for comprehensive gene set ...
Gene-set analysis seeks to identify the biological mechanisms underlying groups of genes with shared functions. Large language models (LLMs) have shown promise in generating functional descriptions ...